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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825935.1_cds_XP_016502498.1_16132
CDS Infomation

[gene=LOC107820689] [db_xref=GeneID:107820689] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g06840] [protein_id=XP_016502498.1] [location=join(4813..4918,5579..5729,7268..7339,7486..7557,8063..8206,8365..8436,9111..9182,10084..10158,11102..11170,11690..11758,11895..11966,12121..12207,12399..12467,12564..13063,13554..13715,14600..14883,15232..15283,15580..15830,16042..16176,16474..16818)] [gbkey=CDS]
Sequence

ATGTCTGGTTCTAAAGTTTCCCTTATTGGGATCAGTTTGATTCTATGGGTTTGCTGGTCT
TTGCTGTTTACAGGGGCAGATAGCCAAGTTACTCATCCAGATGAAGTAAAAGCATTACGT
GCCATCAAGAAAAGTTTGGTTGATCCAAATGGGAATCTCAGTAACTGGAGGAGAGGAGAT
CCATGTAGGTCAAATTGGACTGGAATTTTGTGCTACAAAGAAACAAACAATGACGGTTAC
CTTCATGTTCGAGAACTGCAATTACTGGATATGAATCTGTCAGGAAAATTGTCATCGGAG
CTTGGCCGCTTATCTTACATGAAAATATTGGATGTAATGTGGAATGCAATTACTGGGACA
ATCCCAAAGGAGATAGGAAATATCAAAACACTTGAATTATTGCTTCTCAATGGAAATCAA
TTGACAGGTTCTTTGCCTGAAGAGCTTGGTTATCTTCCCAACTTGAACAGGATACAAATT
GATCAAAATCATATATCAGGGCCCTTACCTGTATCATTTGCAAATTTGAAGAAAACAGAA
CATTTCCACATGAATAACAATTCGATAAGTGGACAAATTCCACCTGAGCTATCTAAACTT
CCAAAGCTACTTCACTTGCTGCTTGATAATAACAACTTATCGGGTTACCTTCCGCCAGAG
CTTGCTCAAATTCCAAATTTGCACATACTTCAGCTTGATAATAACAACTTTGAAGGAAGT
CAGATACCTGAGTCATATGGGAATATGTCACGTTTGTTGAAACTGAGTCTAAGGAACTGT
AGCTTACAGGGACAACTTCCAAATCTGGGCAACATACCGAACCTTACTTACATAGATCTC
AGCTTTAACCAGCTAAGTGGACCCATTCCATCAGAAAAGCTTAGTGACAATATTACAACA
ATTGATCTGTCATACAACAACCTCAACGGAACTATTCCTTCAAACTTTTCAGGCCTTCCC
CATTTGCAGAAAGTGTCACTAGCAAACAATTCATTAAGCGGTTCTGTTCCATCAATAATT
TGGCAAAATAGGACATTCAACGCAACAGAGACACTTATCTTGGATTTGCGGAGCAATAAG
CTTTTGAATATCTCAGGAACTTTGGTTGTCCCACAAAATGTCACTGTTAGTCTTCAAGGA
AATCCGTTGTGTTCAAATTCTGTCCTATTCAAGTTTTGCGAACCTTACAATGGGGATGCC
GATGGCACCTTGCAATTGGCAAACAACACTGATTGTCCTCTTTTGGCATGTCCTCCTCCC
TATGAATATGCCCTGCCATTTCCTACTTGCTTTTGTGCTCTACCTCTGCTTGTAGGATAC
AGGCTAAAAAGTCCTGGGTTTCATGATTTTCGACCATACGTGCATAGGTTTGAGTGGTAT
ATCACGTCTGGTCTTAAGCTGAATCAATCTCAATTACGCCTTAATACATTTGCACTGGAA
GCTGGTCCCCGTGTGAGGATGTACTTGAGGATTTTCCCCATCTTTGTTGATAACAGCAGC
TCTCATTTGTTCAATAAAAGTGAGGTCCTAAGACTCCGGAGCATGTTCACTGGGTGGCTG
ATTCCTGATAATGATTTTTTTGGACCTTATGAACTTCTCAATTTCACCCTACTTGCAGAT
TATAGAGAATTCATCCCCCCTCCTTCATCATCTAGTATTAGCAAGGGAGCTCTTGCAGGA
ATCATACTAGGGGTAATTGCTGGTGCAGTCACAATATCGGCATTCGTATCACTCGTCATA
TTGAGATTGCATATGAAGAAGCACCACCATGCCGGTTCAAAACGGAACCTATTGTCAAAA
ATCTCTGTCAAAATTGATGGTGTTAAGGAGTTCAATTTTGATGAATTGACACTGGCGACC
AAAAATTTTAACAACTCCAGCCTTGTTGGACAAGGAGGGTATGGAAAAGTTTATAAAGGT
ACTTTAACTGATGGGACAGTTGTAGCCATTAAACGAGCTCTAGAGGGATCGTTACAGGGC
CAAAAGGAGTTTCTTACAGAAATTGAACTACTATCTAGGCTACATCACAGAAACCTTGTC
TCTTTACTTGGATACTGTGGTGAAGAAGGTGAACAGATGCTGGTATACGAATTTATGCCT
AATGGTACTCTGAGAGATCATATATCTGGTAAATGTAAAGAACCTCTAAGTTTCGCTATG
CGATTGAGAGTCGCCCTGGGTTCAGCTAAGGGCATACTCTACTTGCACACAGAGGCTGAT
CCTCCCATATTCCATCGAGATATCAAGGCAAGCAATATATTGCTAGACTCTAAATTTATT
GCCAAGGTGGCTGACTTTGGACTTTCACGGCTCGCTCCAGTCCCAGATCTTGAAGGGACT
CTGCCTGCTCATGTATCAACAGTTGTTAAGGGCACTCCGGGATACCTTGACCCAGAGTAT
TTCCTAACTCATAAGTTGACAGACAAGAGTGACGTTTACAGCCTTGGTGTTGTATTCCTT
GAGCTGCTCACTGGAATGCAGCCAATTTCACATGGCAAGAACATTGTTCGGGAGGTCAAC
CTTGCATACCGTTCTGGTATGATATTCAATGTTTTTGATGATCGGATGGGATCTTATCCT
TCGGAATGTGTGGAAAAGTTCATTAATCTGGCTCTCAAATGCTGCCAAGAAGAGACAGAA
GCTCGGCCATCAATGGCAGAAGTGGTTCGAGAACTGGAAAACATACGGCTTATGATGCCC
GAATCCGACTCTATAATTAGAGATTCCCTGGTCACTGATAGTGAAAAGGATAGCAGCACT
CCATCCTCAACCTCAGCTATGAAGTATCCTTATGTTTCAGCTGATGTGTCCGGTAGTGAC
CTTGTCAGTGGTGTTGTTCCTTCCATTCATCCTAGGTGA

Peptide Sequence

PEP ID

XP_016502498.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Nicotiana tabacum]
Sequence

MSGSKVSLIGISLILWVCWSLLFTGADSQVTHPDEVKALRAIKKSLVDPNGNLSNWRRGD
PCRSNWTGILCYKETNNDGYLHVRELQLLDMNLSGKLSSELGRLSYMKILDVMWNAITGT
IPKEIGNIKTLELLLLNGNQLTGSLPEELGYLPNLNRIQIDQNHISGPLPVSFANLKKTE
HFHMNNNSISGQIPPELSKLPKLLHLLLDNNNLSGYLPPELAQIPNLHILQLDNNNFEGS
QIPESYGNMSRLLKLSLRNCSLQGQLPNLGNIPNLTYIDLSFNQLSGPIPSEKLSDNITT
IDLSYNNLNGTIPSNFSGLPHLQKVSLANNSLSGSVPSIIWQNRTFNATETLILDLRSNK
LLNISGTLVVPQNVTVSLQGNPLCSNSVLFKFCEPYNGDADGTLQLANNTDCPLLACPPP
YEYALPFPTCFCALPLLVGYRLKSPGFHDFRPYVHRFEWYITSGLKLNQSQLRLNTFALE
AGPRVRMYLRIFPIFVDNSSSHLFNKSEVLRLRSMFTGWLIPDNDFFGPYELLNFTLLAD
YREFIPPPSSSSISKGALAGIILGVIAGAVTISAFVSLVILRLHMKKHHHAGSKRNLLSK
ISVKIDGVKEFNFDELTLATKNFNNSSLVGQGGYGKVYKGTLTDGTVVAIKRALEGSLQG
QKEFLTEIELLSRLHHRNLVSLLGYCGEEGEQMLVYEFMPNGTLRDHISGKCKEPLSFAM
RLRVALGSAKGILYLHTEADPPIFHRDIKASNILLDSKFIAKVADFGLSRLAPVPDLEGT
LPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN
LAYRSGMIFNVFDDRMGSYPSECVEKFINLALKCCQEETEARPSMAEVVRELENIRLMMP
ESDSIIRDSLVTDSEKDSSTPSSTSAMKYPYVSADVSGSDLVSGVVPSIHPR

Transcript Sequence

Gene sequence data has not been registered.